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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1055 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
HJ928445.1 emblrelpat Sequence 5 from patent US 8692076. 7367 bp unidentified QL-ELE-00-024 87 bp View
HJ928446.1 emblrelpat Sequence 6 from patent US 8692076. 9294 bp unidentified QL-ELE-00-024 87 bp View
HJ928447.1 emblrelpat Sequence 7 from patent US 8692076. 7849 bp unidentified QL-ELE-00-024 87 bp View
HJ928457.1 emblrelpat Sequence 5 from patent US 8692080. 7251 bp unidentified QL-ELE-00-024 87 bp View
HJ928458.1 emblrelpat Sequence 6 from patent US 8692080. 13224 bp unidentified QL-ELE-00-024 87 bp View
HJ928459.1 emblrelpat Sequence 7 from patent US 8692080. 6583 bp unidentified QL-ELE-00-024 87 bp View
HJ970332.1 emblrelpat Sequence 42 from patent US 8722967. 3328 bp unidentified QL-ELE-00-024 87 bp View
HJ970333.1 emblrelpat Sequence 43 from patent US 8722967. 2746 bp unidentified QL-ELE-00-024 87 bp View
HJ970337.1 emblrelpat Sequence 47 from patent US 8722967. 2746 bp unidentified QL-ELE-00-024 87 bp View
HK028387.1 emblrelpat Sequence 137 from patent US 8785163. 28346 bp unidentified QL-ELE-00-024 87 bp View
HK037692.1 emblrelpat Sequence 35 from patent US 8785727. 26755 bp unidentified QL-ELE-00-024 87 bp View
HK037692.1 emblrelpat Sequence 35 from patent US 8785727. 26755 bp unidentified QL-ELE-00-024 87 bp View
HK076653.1 emblrelpat Sequence 3 from patent US 8802928. 3561 bp unidentified QL-ELE-00-024 87 bp View
HK119858.1 emblrelpat Sequence 5 from patent US 8816156. 4427 bp unidentified QL-ELE-00-024 87 bp View
HK119859.1 emblrelpat Sequence 6 from patent US 8816156. 6126 bp unidentified QL-ELE-00-024 87 bp View
HK151034.1 emblrelpat Sequence 43 from patent US 8846892. 643 bp unidentified QL-ELE-00-024 87 bp View
HK156944.1 emblrelpat Sequence 137 from patent US 8853383. 15441 bp unidentified QL-ELE-00-024 87 bp View
HK167381.1 emblrelpat Sequence 42 from patent US 8859854. 3328 bp unidentified QL-ELE-00-024 87 bp View
HK167382.1 emblrelpat Sequence 43 from patent US 8859854. 2746 bp unidentified QL-ELE-00-024 87 bp View
HK167386.1 emblrelpat Sequence 47 from patent US 8859854. 2746 bp unidentified QL-ELE-00-024 87 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.