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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1055 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
HC476827.1 emblrelpat Sequence 3 from Patent EP2166103. 6256 bp unidentified QL-ELE-00-024 87 bp View
HC476828.1 emblrelpat Sequence 4 from Patent EP2166103. 6230 bp unidentified QL-ELE-00-024 87 bp View
HC476829.1 emblrelpat Sequence 5 from Patent EP2166103. 11614 bp unidentified QL-ELE-00-024 87 bp View
HC476830.1 emblrelpat Sequence 6 from Patent EP2166103. 11588 bp unidentified QL-ELE-00-024 87 bp View
HC476833.1 emblrelpat Sequence 9 from Patent EP2166103. 5047 bp unidentified QL-ELE-00-024 87 bp View
HC476903.1 emblrelpat Sequence 79 from Patent EP2166103. 11152 bp synthetic construct QL-ELE-00-024 87 bp View
HC477630.1 emblrelpat Sequence 1 from Patent EP2166104. 12287 bp unidentified QL-ELE-00-024 87 bp View
HC477630.1 emblrelpat Sequence 1 from Patent EP2166104. 12287 bp unidentified QL-ELE-00-024 87 bp View
HC477631.1 emblrelpat Sequence 2 from Patent EP2166104. 12261 bp unidentified QL-ELE-00-024 87 bp View
HC477631.1 emblrelpat Sequence 2 from Patent EP2166104. 12261 bp unidentified QL-ELE-00-024 87 bp View
HC477632.1 emblrelpat Sequence 3 from Patent EP2166104. 6256 bp unidentified QL-ELE-00-024 87 bp View
HC477633.1 emblrelpat Sequence 4 from Patent EP2166104. 6230 bp unidentified QL-ELE-00-024 87 bp View
HC477634.1 emblrelpat Sequence 5 from Patent EP2166104. 11614 bp unidentified QL-ELE-00-024 87 bp View
HC477635.1 emblrelpat Sequence 6 from Patent EP2166104. 11588 bp unidentified QL-ELE-00-024 87 bp View
HC477638.1 emblrelpat Sequence 9 from Patent EP2166104. 5047 bp unidentified QL-ELE-00-024 87 bp View
HC477708.1 emblrelpat Sequence 79 from Patent EP2166104. 11152 bp synthetic construct QL-ELE-00-024 87 bp View
HC510453.1 emblrelpat Sequence 43 from Patent WO2010036946. 643 bp Pisum sativum QL-ELE-00-024 87 bp View
HC725758.1 emblrelpat Sequence 36445 from Patent WO201003... 8504 bp synthetic construct QL-ELE-00-024 87 bp View
HC726252.1 emblrelpat Sequence 24 from Patent WO2010042575. 8504 bp synthetic construct QL-ELE-00-024 87 bp View
HD077368.1 emblrelpat Sequence 6026 from Patent WO2010075143. 8504 bp synthetic construct QL-ELE-00-024 87 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.