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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1055 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
GZ452754.1 emblrelpat Sequence 137 from patent US 8232455. 662 bp unidentified QL-ELE-00-024 87 bp View
GZ452758.1 emblrelpat Sequence 141 from patent US 8232455. 662 bp unidentified QL-ELE-00-024 87 bp View
GZ452762.1 emblrelpat Sequence 145 from patent US 8232455. 662 bp unidentified QL-ELE-00-024 88 bp View
GZ452767.1 emblrelpat Sequence 150 from patent US 8232455. 662 bp unidentified QL-ELE-00-024 87 bp View
GZ452772.1 emblrelpat Sequence 155 from patent US 8232455. 662 bp unidentified QL-ELE-00-024 87 bp View
GZ506810.1 emblrelpat Sequence 60 from patent US 8273952. 2709 bp unidentified QL-ELE-00-024 87 bp View
GZ625414.1 emblrelpat Sequence 5 from patent US 8329989. 7251 bp unidentified QL-ELE-00-024 87 bp View
GZ625415.1 emblrelpat Sequence 6 from patent US 8329989. 13224 bp unidentified QL-ELE-00-024 87 bp View
GZ625416.1 emblrelpat Sequence 7 from patent US 8329989. 6583 bp unidentified QL-ELE-00-024 87 bp View
GZ833718.1 emblrelpat Sequence 35 from patent US 8426676. 670 bp unidentified QL-ELE-00-024 87 bp View
GZ859531.1 emblrelpat Sequence 1354 from patent US 8410336. 8504 bp unidentified QL-ELE-00-024 87 bp View
HB432197.1 emblrelpat Sequence 4818 from Patent WO2009073069. 8504 bp synthetic construct QL-ELE-00-024 87 bp View
HB444292.1 emblrelpat Sequence 1015 from Patent WO2009077406. 670 bp Pisum sativum QL-ELE-00-024 87 bp View
HB976127.1 emblrelpat Sequence 5 from Patent WO2009102873. 7367 bp synthetic construct QL-ELE-00-024 87 bp View
HB976128.1 emblrelpat Sequence 6 from Patent WO2009102873. 9294 bp synthetic construct QL-ELE-00-024 87 bp View
HB976129.1 emblrelpat Sequence 7 from Patent WO2009102873. 7849 bp synthetic construct QL-ELE-00-024 87 bp View
HC086757.1 emblrelpat Sequence 35 from Patent WO2009133145. 26755 bp synthetic construct QL-ELE-00-024 87 bp View
HC086757.1 emblrelpat Sequence 35 from Patent WO2009133145. 26755 bp synthetic construct QL-ELE-00-024 87 bp View
HC185831.1 emblrelpat Sequence 94616 from Patent WO200913... 8504 bp Gossypium hirsutum QL-ELE-00-024 87 bp View
HC307896.1 emblrelpat Sequence 137 from Patent WO2010000708. 15441 bp synthetic construct QL-ELE-00-024 87 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.