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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1655 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_GN042880 nrnl1 Sequence 137 from Patent WO2009016202. 28346 bp unidentified QL-ELE-00-023 137 bp View
NRN_GN042880 nrnl1 Sequence 137 from Patent WO2009016202. 28346 bp unidentified QL-ELE-00-023 137 bp View
NRN_GX386306 nrnl1 Sequence 240 from patent US 7763775. 5214 bp unidentified QL-ELE-00-023 137 bp View
NRN_GX386307 nrnl1 Sequence 241 from patent US 7763775. 5118 bp unidentified QL-ELE-00-023 137 bp View
NRN_GX386308 nrnl1 Sequence 242 from patent US 7763775. 10821 bp unidentified QL-ELE-00-023 137 bp View
NRN_GX386308 nrnl1 Sequence 242 from patent US 7763775. 10821 bp unidentified QL-ELE-00-023 137 bp View
NRN_GX386309 nrnl1 Sequence 243 from patent US 7763775. 10905 bp unidentified QL-ELE-00-023 137 bp View
NRN_GX386309 nrnl1 Sequence 243 from patent US 7763775. 10905 bp unidentified QL-ELE-00-023 137 bp View
NRN_GX879629 nrnl1 Sequence 244 from patent US 7847154. 11809 bp unidentified QL-ELE-00-023 137 bp View
NRN_GX879629 nrnl1 Sequence 244 from patent US 7847154. 11809 bp unidentified QL-ELE-00-023 137 bp View
NRN_GX879630 nrnl1 Sequence 245 from patent US 7847154. 11241 bp unidentified QL-ELE-00-023 137 bp View
NRN_GX879630 nrnl1 Sequence 245 from patent US 7847154. 11241 bp unidentified QL-ELE-00-023 137 bp View
NRN_GX879631 nrnl1 Sequence 246 from patent US 7847154. 12113 bp unidentified QL-ELE-00-023 137 bp View
NRN_GX879631 nrnl1 Sequence 246 from patent US 7847154. 12113 bp unidentified QL-ELE-00-023 137 bp View
NRN_GX879632 nrnl1 Sequence 247 from patent US 7847154. 10291 bp unidentified QL-ELE-00-023 137 bp View
NRN_GX879632 nrnl1 Sequence 247 from patent US 7847154. 10291 bp unidentified QL-ELE-00-023 137 bp View
NRN_GX879633 nrnl1 Sequence 252 from patent US 7847154. 6255 bp unidentified QL-ELE-00-023 137 bp View
NRN_GX879634 nrnl1 Sequence 253 from patent US 7847154. 5690 bp unidentified QL-ELE-00-023 137 bp View
NRN_GX879635 nrnl1 Sequence 254 from patent US 7847154. 6558 bp unidentified QL-ELE-00-023 137 bp View
NRN_GX879636 nrnl1 Sequence 255 from patent US 7847154. 4683 bp unidentified QL-ELE-00-023 137 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.