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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1655 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_DD123295 nrnl1 Plant Artificial Chromosomes, Uses ... 8428 bp unidentified QL-ELE-00-023 137 bp View
NRN_DD123296 nrnl1 Plant Artificial Chromosomes, Uses ... 10549 bp unidentified QL-ELE-00-023 137 bp View
NRN_DD123299 nrnl1 Plant Artificial Chromosomes, Uses ... 12592 bp unidentified QL-ELE-00-023 137 bp View
NRN_DD123299 nrnl1 Plant Artificial Chromosomes, Uses ... 12592 bp unidentified QL-ELE-00-023 137 bp View
NRN_DD123301 nrnl1 Plant Artificial Chromosomes, Uses ... 10122 bp unidentified QL-ELE-00-023 137 bp View
NRN_DD123313 nrnl1 Plant Artificial Chromosomes, Uses ... 14627 bp unidentified QL-ELE-00-023 137 bp View
NRN_DD123313 nrnl1 Plant Artificial Chromosomes, Uses ... 14627 bp unidentified QL-ELE-00-023 137 bp View
NRN_DI001458 nrnl1 PRODUCTION OF BIOLOGICALLY ACTIVE I... 4727 bp unidentified QL-ELE-00-023 137 bp View
NRN_DI104172 nrnl1 PRODUCTION OF RECOMBINANT PROTEINS ... 4553 bp unidentified QL-ELE-00-023 137 bp View
NRN_DI104332 nrnl1 A TRANSFORMATION METHOD FOR VIVIPAR... 12361 bp unidentified QL-ELE-00-023 137 bp View
NRN_DI104623 nrnl1 PRODUCTION OF RECOMBINANT PROTEINS ... 5683 bp unidentified QL-ELE-00-023 137 bp View
NRN_DI122223 nrnl1 Vector for Preparation of Transform... 9762 bp unidentified QL-ELE-00-023 137 bp View
NRN_DI123518 nrnl1 Vector for Preparation of Transform... 9978 bp unidentified QL-ELE-00-023 137 bp View
NRN_DI123906 nrnl1 Vector for Preparation of Transform... 9458 bp unidentified QL-ELE-00-023 137 bp View
NRN_FB700509 nrnl1 Sequence 5 from Patent WO2007107853. 8860 bp unidentified QL-ELE-00-023 137 bp View
NRN_FW335849 nrnl1 gene modification of OASA2 gene via... 19406 bp unidentified QL-ELE-00-023 137 bp View
NRN_FW335851 nrnl1 gene modification of OASA2 gene via... 19406 bp unidentified QL-ELE-00-023 137 bp View
NRN_FW567550 nrnl1 PRODUCTION OF OIL IN MICROORGANISMS... 2435 bp unidentified QL-ELE-00-023 137 bp View
NRN_FW567564 nrnl1 PRODUCTION OF OIL IN MICROORGANISMS... 2615 bp unidentified QL-ELE-00-023 137 bp View
NRN_GM883151 nrnl1 Sequence 32 from Patent WO200813546... 216 bp unidentified QL-ELE-00-023 137 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.