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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1655 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MX115405.1 emblrelpat Sequence 52 from patent US 10858404. 5284 bp unidentified QL-ELE-00-023 137 bp View
MX115406.1 emblrelpat Sequence 53 from patent US 10858404. 5284 bp unidentified QL-ELE-00-023 137 bp View
MX115407.1 emblrelpat Sequence 54 from patent US 10858404. 5284 bp unidentified QL-ELE-00-023 137 bp View
MX115408.1 emblrelpat Sequence 55 from patent US 10858404. 5284 bp unidentified QL-ELE-00-023 137 bp View
MX115409.1 emblrelpat Sequence 56 from patent US 10858404. 5284 bp unidentified QL-ELE-00-023 137 bp View
MX115410.1 emblrelpat Sequence 57 from patent US 10858404. 5284 bp unidentified QL-ELE-00-023 137 bp View
MX115411.1 emblrelpat Sequence 58 from patent US 10858404. 5284 bp unidentified QL-ELE-00-023 137 bp View
MX154548.1 emblrelpat Sequence 4 from patent US 10870862. 11745 bp unidentified QL-ELE-00-023 137 bp View
MX348976.1 emblrelpat Sequence 45 from patent US 10907171. 12740 bp unidentified QL-ELE-00-023 137 bp View
MX445924.1 emblrelpat Sequence 14 from patent US 10947551. 11429 bp unidentified QL-ELE-00-023 137 bp View
MX471401.1 emblrelpat Sequence 3 from patent US 10947556. 5110 bp unidentified QL-ELE-00-023 137 bp View
MX623092.1 emblrelpat Sequence 1 from patent US 10988774. 17778 bp unidentified QL-ELE-00-023 137 bp View
MX881869.1 emblrelpat Sequence 15 from patent US 11008583. 209 bp unidentified QL-ELE-00-023 137 bp View
MY046637.1 emblrelpat Sequence 1 from patent US 11033593. 60074 bp unidentified QL-ELE-00-023 137 bp View
MY046637.1 emblrelpat Sequence 1 from patent US 11033593. 60074 bp unidentified QL-ELE-00-023 137 bp View
MY046638.1 emblrelpat Sequence 2 from patent US 11033593. 44910 bp unidentified QL-ELE-00-023 137 bp View
MY046638.1 emblrelpat Sequence 2 from patent US 11033593. 44910 bp unidentified QL-ELE-00-023 137 bp View
MY046639.1 emblrelpat Sequence 3 from patent US 11033593. 43757 bp unidentified QL-ELE-00-023 137 bp View
MY046639.1 emblrelpat Sequence 3 from patent US 11033593. 43757 bp unidentified QL-ELE-00-023 137 bp View
MY046647.1 emblrelpat Sequence 11 from patent US 11033593. 47800 bp unidentified QL-ELE-00-023 137 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.