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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1655 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
DI351671.1 emblrelpat KR 1020130087410-A/8: TAILORED OILS... 2615 bp Saccharomyces cerevisiae QL-ELE-00-023 137 bp View
DI351771.1 emblrelpat KR 1020130087410-A/152: TAILORED OI... 2435 bp synthetic construct QL-ELE-00-023 137 bp View
DI364432.1 emblrelpat KR 1020130118333-A/8: MICROBIAL OIL... 2615 bp Saccharomyces cerevisiae QL-ELE-00-023 137 bp View
DI449542.1 emblrelpat KR 1020140107356-A/47: METHODS FOR ... 11410 bp synthetic construct QL-ELE-00-023 137 bp View
DI449544.1 emblrelpat KR 1020140107356-A/49: METHODS FOR ... 10386 bp synthetic construct QL-ELE-00-023 137 bp View
DI449554.1 emblrelpat KR 1020140107356-A/59: METHODS FOR ... 4968 bp synthetic construct QL-ELE-00-023 137 bp View
DI486634.1 emblrelpat KR 1020140131602-A/5: PRODUCTION OF... 2435 bp synthetic construct QL-ELE-00-023 137 bp View
DI486648.1 emblrelpat KR 1020140131602-A/25: PRODUCTION O... 2615 bp synthetic construct QL-ELE-00-023 137 bp View
DI486672.1 emblrelpat KR 1020140132418-A/5: PROGASTRIN AN... 2435 bp synthetic construct QL-ELE-00-023 137 bp View
DI486686.1 emblrelpat KR 1020140132418-A/25: PROGASTRIN A... 2615 bp synthetic construct QL-ELE-00-023 137 bp View
DI495810.1 emblrelpat KR 1020150057495-A/1: Mixture compr... 16236 bp unidentified QL-ELE-00-023 137 bp View
DI495811.1 emblrelpat KR 1020150057495-A/2: Mixture compr... 13901 bp unidentified QL-ELE-00-023 137 bp View
DL142314.1 emblrelpat PRODUCTION OF TISSUE FACTOR IN PLANTS. 10808 bp synthetic construct QL-ELE-00-023 137 bp View
DM131247.1 emblrelpat CHROMOSOME-BASED PLATFORMS. 11182 bp synthetic construct QL-ELE-00-023 137 bp View
DM131247.1 emblrelpat CHROMOSOME-BASED PLATFORMS. 11182 bp synthetic construct QL-ELE-00-023 137 bp View
DM131248.1 emblrelpat CHROMOSOME-BASED PLATFORMS. 8428 bp synthetic construct QL-ELE-00-023 137 bp View
DM131250.1 emblrelpat CHROMOSOME-BASED PLATFORMS. 10549 bp synthetic construct QL-ELE-00-023 137 bp View
DM131253.1 emblrelpat CHROMOSOME-BASED PLATFORMS. 12592 bp synthetic construct QL-ELE-00-023 137 bp View
DM131253.1 emblrelpat CHROMOSOME-BASED PLATFORMS. 12592 bp synthetic construct QL-ELE-00-023 137 bp View
DM131255.1 emblrelpat CHROMOSOME-BASED PLATFORMS. 10122 bp synthetic construct QL-ELE-00-023 137 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.