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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1558 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
DI356603.1 emblrelpat KR 1020130098282-A/64: LOWERING SAT... 14575 bp synthetic construct QL-ELE-00-021 109 bp View
DI356604.1 emblrelpat KR 1020130098282-A/65: LOWERING SAT... 14602 bp synthetic construct QL-ELE-00-021 109 bp View
DI356605.1 emblrelpat KR 1020130098282-A/66: LOWERING SAT... 10915 bp synthetic construct QL-ELE-00-021 109 bp View
DI356611.1 emblrelpat KR 1020130098282-A/74: LOWERING SAT... 14103 bp synthetic construct QL-ELE-00-021 109 bp View
DI356612.1 emblrelpat KR 1020130098282-A/75: LOWERING SAT... 13812 bp synthetic construct QL-ELE-00-021 109 bp View
DI366396.1 emblrelpat KR 1020130126646-A/9: SOYBEAN EVENT... 7914 bp synthetic construct QL-ELE-00-021 109 bp View
DI366396.1 emblrelpat KR 1020130126646-A/9: SOYBEAN EVENT... 7914 bp synthetic construct QL-ELE-00-021 109 bp View
DI366396.1 emblrelpat KR 1020130126646-A/9: SOYBEAN EVENT... 7914 bp synthetic construct QL-ELE-00-021 109 bp View
DI366396.1 emblrelpat KR 1020130126646-A/9: SOYBEAN EVENT... 7914 bp synthetic construct QL-ELE-00-021 109 bp View
DI366397.1 emblrelpat KR 1020130126646-A/10: SOYBEAN EVEN... 9206 bp synthetic construct QL-ELE-00-021 109 bp View
DI366397.1 emblrelpat KR 1020130126646-A/10: SOYBEAN EVEN... 9206 bp synthetic construct QL-ELE-00-021 109 bp View
DI366397.1 emblrelpat KR 1020130126646-A/10: SOYBEAN EVEN... 9206 bp synthetic construct QL-ELE-00-021 109 bp View
DI366397.1 emblrelpat KR 1020130126646-A/10: SOYBEAN EVEN... 9206 bp synthetic construct QL-ELE-00-021 109 bp View
DI389528.1 emblrelpat KR 1020140007352-A/13: STACKED HERB... 10256 bp synthetic construct QL-ELE-00-021 109 bp View
DI389542.1 emblrelpat KR 1020140007352-A/27: STACKED HERB... 13659 bp synthetic construct QL-ELE-00-021 109 bp View
DI389543.1 emblrelpat KR 1020140007352-A/28: STACKED HERB... 14619 bp synthetic construct QL-ELE-00-021 109 bp View
DI389544.1 emblrelpat KR 1020140007352-A/29: STACKED HERB... 15294 bp synthetic construct QL-ELE-00-021 109 bp View
DI404829.1 emblrelpat KR 1020140044388-A/18: STACKED HERB... 12011 bp synthetic construct QL-ELE-00-021 109 bp View
DI404832.1 emblrelpat KR 1020140044388-A/21: STACKED HERB... 10256 bp synthetic construct QL-ELE-00-021 109 bp View
DI405718.1 emblrelpat KR 1020140063617-A/11: PRODUCTION O... 33003 bp synthetic construct QL-ELE-00-021 109 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.