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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1558 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
DI406425.1 emblrelpat KR 1020140057288-A/14: SOYBEAN EVEN... 15294 bp synthetic construct QL-ELE-00-021 109 bp View
DI485381.1 emblrelpat KR 1020140130506-A/3: SUGARCANE BAC... 1828 bp Streptomyces viridochromogenes QL-ELE-00-021 109 bp View
DI485383.1 emblrelpat KR 1020140130506-A/5: SUGARCANE BAC... 1828 bp Streptomyces viridochromogenes QL-ELE-00-021 109 bp View
DI485385.1 emblrelpat KR 1020140130506-A/7: SUGARCANE BAC... 1828 bp Streptomyces viridochromogenes QL-ELE-00-021 109 bp View
DI485387.1 emblrelpat KR 1020140130506-A/9: SUGARCANE BAC... 1828 bp Streptomyces viridochromogenes QL-ELE-00-021 109 bp View
DL476422.1 emblrelpat CORN EVENT DAS-59122-7 AND METHODS ... 2987 bp synthetic construct QL-ELE-00-021 109 bp View
DL476423.1 emblrelpat CORN EVENT DAS-59122-7 AND METHODS ... 11922 bp synthetic construct QL-ELE-00-021 109 bp View
DL476424.1 emblrelpat CORN EVENT DAS-59122-7 AND METHODS ... 7390 bp synthetic construct QL-ELE-00-021 109 bp View
DL476427.1 emblrelpat CORN EVENT DAS-59122-7 AND METHODS ... 2830 bp synthetic construct QL-ELE-00-021 109 bp View
DM036186.1 emblrelpat Anti-T Cell and Autoantigen Treatme... 11674 bp Homo sapiens QL-ELE-00-021 109 bp View
DM036188.1 emblrelpat Anti-T Cell and Autoantigen Treatme... 13025 bp Homo sapiens QL-ELE-00-021 109 bp View
DM036191.1 emblrelpat Anti-T Cell and Autoantigen Treatme... 10510 bp Homo sapiens QL-ELE-00-021 109 bp View
DM139743.1 emblrelpat SAFFLOWER WITH ELEVATED GAMMA-LINOL... 7803 bp synthetic construct QL-ELE-00-021 109 bp View
DM139744.1 emblrelpat SAFFLOWER WITH ELEVATED GAMMA-LINOL... 5003 bp synthetic construct QL-ELE-00-021 109 bp View
DM139745.1 emblrelpat SAFFLOWER WITH ELEVATED GAMMA-LINOL... 5013 bp synthetic construct QL-ELE-00-021 109 bp View
DM378888.1 emblrelpat Gene tolerant to phosphinothricin t... 562 bp Streptomyces viridochromogenes QL-ELE-00-021 109 bp View
DQ156557.1 emblreltgn Zea mays transgenic phosphinothrici... 4989 bp Zea mays QL-ELE-00-021 109 bp View
DQ156557.1 nt Zea mays transgenic phosphinothrici... 4989 bp Zea mays QL-ELE-00-021 109 bp View
EA021058.1 emblrelpat Sequence 12 from patent US 7132291. 4767 bp unidentified QL-ELE-00-021 109 bp View
EA021065.1 emblrelpat Sequence 24 from patent US 7132291. 10575 bp unidentified QL-ELE-00-021 109 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.