European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 166 amplicons

Restrict to taxon(s):


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MO052470.1 emblrelpat Sequence 31 from patent US 10316330. 12218 bp unidentified QL-ELE-00-019 108 bp View
MO052471.1 emblrelpat Sequence 32 from patent US 10316330. 12797 bp unidentified QL-ELE-00-019 108 bp View
MO052472.1 emblrelpat Sequence 33 from patent US 10316330. 11906 bp unidentified QL-ELE-00-019 108 bp View
MO905739.1 emblrelpat Sequence 30521 from patent US 10570408. 11722 bp unidentified QL-ELE-00-019 108 bp View
MV358761.1 emblrelpat Sequence 94614 from patent US 10696975. 11722 bp unidentified QL-ELE-00-019 108 bp View
MV639803.1 emblrelpat Sequence 67779 from patent US 10760091. 12554 bp unidentified QL-ELE-00-019 108 bp View
MV670661.1 emblrelpat Sequence 1 from patent US 10772276. 8590 bp unidentified QL-ELE-00-019 108 bp View
MV670662.1 emblrelpat Sequence 2 from patent US 10772276. 7794 bp unidentified QL-ELE-00-019 108 bp View
NRN_AR690568 nrnl1 Sequence 74 from patent US 6906245.... 1587 bp unidentified QL-ELE-00-019 108 bp View
NRN_CS421030 nrnl1 Sequence 1 from Patent WO2006099249... 8590 bp unidentified QL-ELE-00-019 108 bp View
NRN_CS421031 nrnl1 Sequence 2 from Patent WO2006099249... 7794 bp unidentified QL-ELE-00-019 108 bp View
NRN_DJ058152 nrnl1 Corn Plant MON88017 and Composition... 7450 bp unidentified QL-ELE-00-019 108 bp View
NRN_FW310534 nrnl1 PRODUCTION OF HIGH TRYPTOPHAN MAIZE... 13596 bp unidentified QL-ELE-00-019 108 bp View
NRN_FW310535 nrnl1 PRODUCTION OF HIGH TRYPTOPHAN MAIZE... 13559 bp unidentified QL-ELE-00-019 108 bp View
NRN_FW310536 nrnl1 PRODUCTION OF HIGH TRYPTOPHAN MAIZE... 13905 bp unidentified QL-ELE-00-019 108 bp View
NRN_FW310537 nrnl1 PRODUCTION OF HIGH TRYPTOPHAN MAIZE... 13905 bp unidentified QL-ELE-00-019 108 bp View
NRN_FW310538 nrnl1 PRODUCTION OF HIGH TRYPTOPHAN MAIZE... 13905 bp unidentified QL-ELE-00-019 108 bp View
NRN_FW310539 nrnl1 PRODUCTION OF HIGH TRYPTOPHAN MAIZE... 13888 bp unidentified QL-ELE-00-019 108 bp View
NRN_FW310540 nrnl1 PRODUCTION OF HIGH TRYPTOPHAN MAIZE... 13888 bp unidentified QL-ELE-00-019 108 bp View
NRN_FW377973 nrnl1 Transgenic plant event detection. ... 132 bp unidentified QL-ELE-00-019 108 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.