European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 166 amplicons

Restrict to taxon(s):


Record ID Database Record description Record length Taxon Method Amplicon size Match details
HL784290.1 emblrelpat Sequence 19940 from patent US 9315822. 12554 bp unidentified QL-ELE-00-019 108 bp View
HL867351.1 emblrelpat Sequence 1 from patent US 9365863. 12248 bp unidentified QL-ELE-00-019 108 bp View
HL867354.1 emblrelpat Sequence 4 from patent US 9365863. 11248 bp unidentified QL-ELE-00-019 108 bp View
HL867365.1 emblrelpat Sequence 16 from patent US 9365863. 4370 bp unidentified QL-ELE-00-019 108 bp View
HL867374.1 emblrelpat Sequence 26 from patent US 9365863. 11743 bp unidentified QL-ELE-00-019 108 bp View
HL867375.1 emblrelpat Sequence 27 from patent US 9365863. 12322 bp unidentified QL-ELE-00-019 108 bp View
HL867376.1 emblrelpat Sequence 28 from patent US 9365863. 11787 bp unidentified QL-ELE-00-019 108 bp View
HL867377.1 emblrelpat Sequence 29 from patent US 9365863. 12322 bp unidentified QL-ELE-00-019 108 bp View
HL867378.1 emblrelpat Sequence 30 from patent US 9365863. 12797 bp unidentified QL-ELE-00-019 108 bp View
HL867379.1 emblrelpat Sequence 31 from patent US 9365863. 12218 bp unidentified QL-ELE-00-019 108 bp View
HL867380.1 emblrelpat Sequence 32 from patent US 9365863. 12797 bp unidentified QL-ELE-00-019 108 bp View
HL867381.1 emblrelpat Sequence 33 from patent US 9365863. 11906 bp unidentified QL-ELE-00-019 108 bp View
HL991684.1 emblrelpat Sequence 36 from patent US 9428764. 1596 bp unidentified QL-ELE-00-019 108 bp View
HV702026.1 emblrelpat JP 2012070734-A/5: Corn Plant MON88... 7450 bp synthetic construct QL-ELE-00-019 108 bp View
HW665120.1 emblrelpat JP 2013223510-A/75: Transgenic plan... 132 bp synthetic construct QL-ELE-00-019 108 bp View
HZ345395.1 emblrelpat JP 2015519051-A/1: CORN EVENT MON 8... 12248 bp synthetic construct QL-ELE-00-019 108 bp View
HZ345398.1 emblrelpat JP 2015519051-A/4: CORN EVENT MON 8... 11248 bp synthetic construct QL-ELE-00-019 108 bp View
HZ345409.1 emblrelpat JP 2015519051-A/15: CORN EVENT MON ... 4370 bp synthetic construct QL-ELE-00-019 108 bp View
HZ345418.1 emblrelpat JP 2015519051-A/24: CORN EVENT MON ... 11743 bp synthetic construct QL-ELE-00-019 108 bp View
HZ345419.1 emblrelpat JP 2015519051-A/25: CORN EVENT MON ... 12322 bp synthetic construct QL-ELE-00-019 108 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.