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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 15373 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_JA643458 nrnl1 Sequence 20 from Patent EP2385129. 9503 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643458 nrnl1 Sequence 20 from Patent EP2385129. 9503 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643459 nrnl1 Sequence 21 from Patent EP2385129. 8870 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643459 nrnl1 Sequence 21 from Patent EP2385129. 8870 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643460 nrnl1 Sequence 22 from Patent EP2385129. 9307 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643460 nrnl1 Sequence 22 from Patent EP2385129. 9307 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643461 nrnl1 Sequence 23 from Patent EP2385129. 9272 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643461 nrnl1 Sequence 23 from Patent EP2385129. 9272 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643462 nrnl1 Sequence 24 from Patent EP2385129. 9424 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643462 nrnl1 Sequence 24 from Patent EP2385129. 9424 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643463 nrnl1 Sequence 25 from Patent EP2385129. 9243 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643463 nrnl1 Sequence 25 from Patent EP2385129. 9243 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643477 nrnl1 Sequence 39 from Patent EP2385129. 2865 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643490 nrnl1 Sequence 52 from Patent EP2385129. 2145 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643493 nrnl1 Sequence 55 from Patent EP2385129. 2145 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643497 nrnl1 Sequence 59 from Patent EP2385129. 2451 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643498 nrnl1 Sequence 60 from Patent EP2385129. 1818 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643499 nrnl1 Sequence 61 from Patent EP2385129. 2255 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643500 nrnl1 Sequence 62 from Patent EP2385129. 2220 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643501 nrnl1 Sequence 63 from Patent EP2385129. 2372 bp unidentified QL-ELE-00-007 180 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.