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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 15373 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_JA515160 nrnl1 Sequence 34 from Patent WO2011112945. 18235 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA515160 nrnl1 Sequence 34 from Patent WO2011112945. 18235 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA515161 nrnl1 Sequence 35 from Patent WO2011112945. 18649 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA515161 nrnl1 Sequence 35 from Patent WO2011112945. 18649 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA515162 nrnl1 Sequence 36 from Patent WO2011112945. 16496 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA515163 nrnl1 Sequence 37 from Patent WO2011112945. 15344 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA515164 nrnl1 Sequence 38 from Patent WO2011112945. 17728 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA515164 nrnl1 Sequence 38 from Patent WO2011112945. 17728 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA515165 nrnl1 Sequence 39 from Patent WO2011112945. 17746 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA515165 nrnl1 Sequence 39 from Patent WO2011112945. 17746 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA640276 nrnl1 Sequence 22 from Patent WO2011136651. 5201 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA640277 nrnl1 Sequence 23 from Patent WO2011136651. 13647 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643441 nrnl1 Sequence 3 from Patent EP2385129. 12949 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643442 nrnl1 Sequence 4 from Patent EP2385129. 14681 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643451 nrnl1 Sequence 13 from Patent EP2385129. 11295 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643453 nrnl1 Sequence 15 from Patent EP2385129. 11295 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643454 nrnl1 Sequence 16 from Patent EP2385129. ... 2891 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643455 nrnl1 Sequence 17 from Patent EP2385129. 12062 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643456 nrnl1 Sequence 18 from Patent EP2385129. 12616 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA643457 nrnl1 Sequence 19 from Patent EP2385129. 12619 bp unidentified QL-ELE-00-007 180 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.