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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1572 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_CS401581 nrnl1 Sequence 78 from Patent WO200601307... 10414 bp unidentified QL-CON-00-014 163 bp View
NRN_CS401582 nrnl1 Sequence 79 from Patent WO200601307... 11152 bp unidentified QL-CON-00-014 163 bp View
NRN_CS437395 nrnl1 Sequence 6 from Patent WO2006105946... 3987 bp unidentified QL-CON-00-014 152 bp View
NRN_CS539256 nrnl1 Sequence 68 from Patent WO200603370... 3158 bp unidentified QL-CON-00-014 163 bp View
NRN_CS559086 nrnl1 Sequence 1 from Patent WO2006032426. 7447 bp unidentified QL-CON-00-014 163 bp View
NRN_CS559098 nrnl1 Sequence 13 from Patent WO2006032426. 9103 bp unidentified QL-CON-00-014 163 bp View
NRN_CS804763 nrnl1 Sequence 100 from Patent WO20070441... 6602 bp unidentified QL-CON-00-014 149 bp View
NRN_CS811069 nrnl1 Sequence 18 from Patent WO200710729... 7954 bp unidentified QL-CON-00-014 170 bp View
NRN_DI001984 nrnl1 PRODUCTION OF BIOLOGICALLY ACTIVE I... 5013 bp unidentified QL-CON-00-014 163 bp View
NRN_DI122704 nrnl1 Analytic Method of Nucleotides Sequ... 606 bp unidentified QL-CON-00-014 163 bp View
NRN_DL469834 nrnl1 REPRODUCTIVE ABLATION CONSTRUCTS. ... 8534 bp unidentified QL-CON-00-014 163 bp View
NRN_DL469835 nrnl1 REPRODUCTIVE ABLATION CONSTRUCTS. ... 11300 bp unidentified QL-CON-00-014 163 bp View
NRN_DL470915 nrnl1 COMPOSITIONS AND METHODS FOR MODULA... 15856 bp unidentified QL-CON-00-014 170 bp View
NRN_DL470916 nrnl1 COMPOSITIONS AND METHODS FOR MODULA... 16280 bp unidentified QL-CON-00-014 170 bp View
NRN_DL470956 nrnl1 COMPOSITIONS AND METHODS FOR MODULA... 11300 bp unidentified QL-CON-00-014 163 bp View
NRN_DM094783 nrnl1 Method for screening for plants wit... 17236 bp unidentified QL-CON-00-014 163 bp View
NRN_FB702577 nrnl1 Sequence 6 from Patent EP1882742. ... 11465 bp unidentified QL-CON-00-014 152 bp View
NRN_FB742932 nrnl1 Sequence 23 from Patent WO2008013450. 14256 bp unidentified QL-CON-00-014 149 bp View
NRN_FW366744 nrnl1 WOODY PLANTS HAVING IMPROVED GROWTH... 13599 bp unidentified QL-CON-00-014 140 bp View
NRN_GN042880 nrnl1 Sequence 137 from Patent WO2009016202. 28346 bp unidentified QL-CON-00-014 163 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.