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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1572 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_CQ792334 nrnl1 Sequence 79 from Patent WO200402064... 5517 bp unidentified QL-CON-00-014 163 bp View
NRN_CQ792354 nrnl1 Sequence 99 from Patent WO200402064... 5544 bp unidentified QL-CON-00-014 163 bp View
NRN_CQ792355 nrnl1 Sequence 100 from Patent WO20040206... 6484 bp unidentified QL-CON-00-014 163 bp View
NRN_CQ792385 nrnl1 Sequence 130 from Patent WO20040206... 5544 bp unidentified QL-CON-00-014 163 bp View
NRN_CQ792386 nrnl1 Sequence 131 from Patent WO20040206... 5668 bp unidentified QL-CON-00-014 163 bp View
NRN_CQ792387 nrnl1 Sequence 132 from Patent WO20040206... 6608 bp unidentified QL-CON-00-014 163 bp View
NRN_CQ792388 nrnl1 Sequence 133 from Patent WO20040206... 5668 bp unidentified QL-CON-00-014 163 bp View
NRN_CQ792389 nrnl1 Sequence 134 from Patent WO20040206... 5074 bp unidentified QL-CON-00-014 163 bp View
NRN_CQ792390 nrnl1 Sequence 135 from Patent WO20040206... 5076 bp unidentified QL-CON-00-014 163 bp View
NRN_CQ792391 nrnl1 Sequence 136 from Patent WO20040206... 5549 bp unidentified QL-CON-00-014 163 bp View
NRN_CQ792392 nrnl1 Sequence 137 from Patent WO20040206... 6352 bp unidentified QL-CON-00-014 163 bp View
NRN_CQ792393 nrnl1 Sequence 138 from Patent WO20040206... 5549 bp unidentified QL-CON-00-014 163 bp View
NRN_CQ792394 nrnl1 Sequence 139 from Patent WO20040206... 5673 bp unidentified QL-CON-00-014 163 bp View
NRN_CQ792395 nrnl1 Sequence 140 from Patent WO20040206... 6476 bp unidentified QL-CON-00-014 163 bp View
NRN_CQ792396 nrnl1 Sequence 141 from Patent WO20040206... 5673 bp unidentified QL-CON-00-014 163 bp View
NRN_CQ792397 nrnl1 Sequence 142 from Patent WO20040206... 5544 bp unidentified QL-CON-00-014 163 bp View
NRN_CQ792398 nrnl1 Sequence 143 from Patent WO20040206... 6474 bp unidentified QL-CON-00-014 163 bp View
NRN_CQ792399 nrnl1 Sequence 144 from Patent WO20040206... 5544 bp unidentified QL-CON-00-014 163 bp View
NRN_CQ792400 nrnl1 Sequence 145 from Patent WO20040206... 5668 bp unidentified QL-CON-00-014 163 bp View
NRN_CQ792401 nrnl1 Sequence 146 from Patent WO20040206... 6598 bp unidentified QL-CON-00-014 163 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.