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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1572 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_AX481633 nrnl1 Sequence 23 from Patent WO02057465.... 13002 bp unidentified QL-CON-00-014 165 bp View
NRN_AX481634 nrnl1 Sequence 24 from Patent WO02057465.... 13905 bp unidentified QL-CON-00-014 165 bp View
NRN_AX481635 nrnl1 Sequence 25 from Patent WO02057465.... 15430 bp unidentified QL-CON-00-014 165 bp View
NRN_AX481638 nrnl1 Sequence 28 from Patent WO02057465.... 17752 bp unidentified QL-CON-00-014 165 bp View
NRN_AX590202 nrnl1 Sequence 9 from Patent WO02083888. ... 12789 bp unidentified QL-CON-00-014 140 bp View
NRN_AX683020 nrnl1 Sequence 23 from Patent WO03006660.... 7554 bp unidentified QL-CON-00-014 163 bp View
NRN_AX683022 nrnl1 Sequence 25 from Patent WO03006660.... 8441 bp unidentified QL-CON-00-014 163 bp View
NRN_AX717082 nrnl1 Sequence 73 from Patent WO03020939.... 10828 bp unidentified QL-CON-00-014 163 bp View
NRN_AX717083 nrnl1 Sequence 74 from Patent WO03020939.... 10828 bp unidentified QL-CON-00-014 163 bp View
NRN_AX717084 nrnl1 Sequence 75 from Patent WO03020939.... 10036 bp unidentified QL-CON-00-014 163 bp View
NRN_AX717085 nrnl1 Sequence 76 from Patent WO03020939.... 10036 bp unidentified QL-CON-00-014 163 bp View
NRN_AX765918 nrnl1 Sequence 4 from Patent WO02097097. ... 5250 bp unidentified QL-CON-00-014 163 bp View
NRN_AX765954 nrnl1 Sequence 40 from Patent WO02097097.... 5247 bp unidentified QL-CON-00-014 163 bp View
NRN_AX765955 nrnl1 Sequence 41 from Patent WO02097097.... 5373 bp unidentified QL-CON-00-014 163 bp View
NRN_AX765956 nrnl1 Sequence 42 from Patent WO02097097.... 6285 bp unidentified QL-CON-00-014 163 bp View
NRN_AX765957 nrnl1 Sequence 43 from Patent WO02097097.... 6409 bp unidentified QL-CON-00-014 163 bp View
NRN_AX765962 nrnl1 Sequence 48 from Patent WO02097097.... 5511 bp unidentified QL-CON-00-014 163 bp View
NRN_AX765963 nrnl1 Sequence 49 from Patent WO02097097.... 5635 bp unidentified QL-CON-00-014 163 bp View
NRN_AX765964 nrnl1 Sequence 50 from Patent WO02097097.... 6299 bp unidentified QL-CON-00-014 163 bp View
NRN_AX765965 nrnl1 Sequence 51 from Patent WO02097097.... 6423 bp unidentified QL-CON-00-014 163 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.