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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1572 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
AX481632.1 emblrelpat Sequence 22 from Patent WO02057465. 12079 bp unidentified QL-CON-00-014 165 bp View
AX481633.1 emblrelpat Sequence 23 from Patent WO02057465. 13002 bp unidentified QL-CON-00-014 165 bp View
AX481634.1 emblrelpat Sequence 24 from Patent WO02057465. 13905 bp unidentified QL-CON-00-014 165 bp View
AX481635.1 emblrelpat Sequence 25 from Patent WO02057465. 15430 bp unidentified QL-CON-00-014 165 bp View
AX481638.1 emblrelpat Sequence 28 from Patent WO02057465. 17752 bp unidentified QL-CON-00-014 165 bp View
AX481959.1 emblrelpat Sequence 20 from Patent WO02057464. 12093 bp unidentified QL-CON-00-014 165 bp View
AX481960.1 emblrelpat Sequence 21 from Patent WO02057464. 12085 bp unidentified QL-CON-00-014 165 bp View
AX481961.1 emblrelpat Sequence 22 from Patent WO02057464. 12079 bp unidentified QL-CON-00-014 165 bp View
AX481962.1 emblrelpat Sequence 23 from Patent WO02057464. 13002 bp unidentified QL-CON-00-014 165 bp View
AX481963.1 emblrelpat Sequence 24 from Patent WO02057464. 13905 bp unidentified QL-CON-00-014 165 bp View
AX481964.1 emblrelpat Sequence 25 from Patent WO02057464. 15430 bp unidentified QL-CON-00-014 165 bp View
AX481967.1 emblrelpat Sequence 28 from Patent WO02057464. 17752 bp unidentified QL-CON-00-014 165 bp View
AX590202.1 emblrelpat Sequence 9 from Patent WO02083888. 12789 bp synthetic construct QL-CON-00-014 140 bp View
AX683020.1 emblrelpat Sequence 23 from Patent WO03006660. 7554 bp synthetic construct QL-CON-00-014 163 bp View
AX683022.1 emblrelpat Sequence 25 from Patent WO03006660. 8441 bp synthetic construct QL-CON-00-014 163 bp View
AX696000.1 emblrelpat Sequence 12 from Patent WO03008596. 7554 bp synthetic construct QL-CON-00-014 163 bp View
AX696002.1 emblrelpat Sequence 14 from Patent WO03008596. 8441 bp synthetic construct QL-CON-00-014 163 bp View
AX717082.1 emblrelpat Sequence 73 from Patent WO03020939. 10828 bp synthetic construct QL-CON-00-014 163 bp View
AX717083.1 emblrelpat Sequence 74 from Patent WO03020939. 10828 bp synthetic construct QL-CON-00-014 163 bp View
AX717084.1 emblrelpat Sequence 75 from Patent WO03020939. 10036 bp synthetic construct QL-CON-00-014 163 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.