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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 206 amplicons

Restrict to taxon(s):


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MA846724.1 emblrelpat JP 2018537080-A/53: METHODS AND COM... 4857 bp synthetic construct QL-CON-00-011 102 bp View
MI019114.1 emblrelpat Sequence 5 from patent US 9725772. 11978 bp unidentified QL-CON-00-011 102 bp View
MI019115.1 emblrelpat Sequence 6 from patent US 9725772. 16752 bp unidentified QL-CON-00-011 102 bp View
MI123453.1 emblrelpat Sequence 5 from patent US 9790561. 11978 bp unidentified QL-CON-00-011 102 bp View
MI123454.1 emblrelpat Sequence 6 from patent US 9790561. 16752 bp unidentified QL-CON-00-011 102 bp View
MI415436.1 emblrelpat Sequence 23 from patent US 9879321. 11922 bp unidentified QL-CON-00-011 102 bp View
MI415437.1 emblrelpat Sequence 24 from patent US 9879321. 7390 bp unidentified QL-CON-00-011 102 bp View
MI415440.1 emblrelpat Sequence 27 from patent US 9879321. 2830 bp unidentified QL-CON-00-011 102 bp View
MI880446.1 emblrelpat Sequence 24 from patent US 10023921. 11361 bp unidentified QL-CON-00-011 102 bp View
MI880447.1 emblrelpat Sequence 25 from patent US 10023921. 6186 bp unidentified QL-CON-00-011 102 bp View
MI880449.1 emblrelpat Sequence 27 from patent US 10023921. 3347 bp unidentified QL-CON-00-011 102 bp View
MI960783.1 emblrelpat Sequence 51 from patent US 10053675. 11208 bp unidentified QL-CON-00-011 104 bp View
MI960784.1 emblrelpat Sequence 52 from patent US 10053675. 11208 bp unidentified QL-CON-00-011 104 bp View
MM577931.1 emblrelpat Sequence 427 from patent US 10174331. 7390 bp unidentified QL-CON-00-011 102 bp View
MM600068.1 emblrelpat Sequence 9 from patent US 10184134. 7914 bp unidentified QL-CON-00-011 104 bp View
MM600068.1 emblrelpat Sequence 9 from patent US 10184134. 7914 bp unidentified QL-CON-00-011 104 bp View
MM600069.1 emblrelpat Sequence 10 from patent US 10184134. 9206 bp unidentified QL-CON-00-011 104 bp View
MM600069.1 emblrelpat Sequence 10 from patent US 10184134. 9206 bp unidentified QL-CON-00-011 104 bp View
MM610849.1 emblrelpat Sequence 5 from patent US 10190179. 11978 bp unidentified QL-CON-00-011 102 bp View
MM610850.1 emblrelpat Sequence 6 from patent US 10190179. 16752 bp unidentified QL-CON-00-011 102 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.