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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 213 amplicons

Restrict to taxon(s):


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MM577830.1 emblrelpat Sequence 326 from patent US 10174331. 6661 bp unidentified QL-CON-00-005 208 bp View
MM577931.1 emblrelpat Sequence 427 from patent US 10174331. 7390 bp unidentified QL-CON-00-005 210 bp View
MM610849.1 emblrelpat Sequence 5 from patent US 10190179. 11978 bp unidentified QL-CON-00-005 210 bp View
MM610850.1 emblrelpat Sequence 6 from patent US 10190179. 16752 bp unidentified QL-CON-00-005 210 bp View
MO361551.1 emblrelpat Sequence 5 from patent US 10407688. 11978 bp unidentified QL-CON-00-005 210 bp View
MO361552.1 emblrelpat Sequence 6 from patent US 10407688. 16752 bp unidentified QL-CON-00-005 210 bp View
MO567610.1 emblrelpat Sequence 88 from patent US 10501748. 6661 bp unidentified QL-CON-00-005 208 bp View
MO567729.1 emblrelpat Sequence 289 from patent US 10501748. 6661 bp unidentified QL-CON-00-005 208 bp View
MO567736.1 emblrelpat Sequence 296 from patent US 10501748. 3893 bp unidentified QL-CON-00-005 208 bp View
MO567743.1 emblrelpat Sequence 303 from patent US 10501748. 11938 bp unidentified QL-CON-00-005 208 bp View
MO567754.1 emblrelpat Sequence 314 from patent US 10501748. 3336 bp unidentified QL-CON-00-005 208 bp View
MX927506.1 emblrelpat Sequence 22 from patent US 11053544. 2987 bp unidentified QL-CON-00-005 210 bp View
MX927507.1 emblrelpat Sequence 23 from patent US 11053544. 11922 bp unidentified QL-CON-00-005 210 bp View
MX927508.1 emblrelpat Sequence 24 from patent US 11053544. 7390 bp unidentified QL-CON-00-005 210 bp View
MX927511.1 emblrelpat Sequence 27 from patent US 11053544. 2830 bp unidentified QL-CON-00-005 210 bp View
NRN_A95052 nrnl1 Sequence 9 from Patent WO9929880. ... 4186 bp unidentified QL-CON-00-005 191 bp View
NRN_AX195438 nrnl1 Sequence 1 from Patent WO0151654. ... 3983 bp unidentified QL-CON-00-005 209 bp View
NRN_BD014493 nrnl1 Transgenic corn and method of detec... 820 bp unidentified QL-CON-00-005 210 bp View
NRN_CQ924483 nrnl1 Sequence 10 from Patent EP1477557. ... 13737 bp unidentified QL-CON-00-005 210 bp View
NRN_CQ945862 nrnl1 Sequence 24 from Patent WO200409944... 11361 bp unidentified QL-CON-00-005 210 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.