Amplicon details

Amplicon:

572 bp
1     cgaaattggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aaagggcaat cctgagccaa atcctgtttt ccgaaaccaa aggttcagaa
151   agtgaaaaag ggataggtgc agagactcaa cggaagctgt tctaacaaat
201   ggagttagat gcattagtag agagagatct ttccatcgaa aaatcagaaa
251   gaatgaagtg aaggataaac gtatatacat acgtattgaa tactatatca
301   aatgattaat gacgacccga ctgaatctgt atttttatat atgaaaaacg
351   gaagaattgg tgtgaataga ttccacattg aagaaagatc gaatattcat
401   tgatcaaatg attcactcca tagtctgata gatcttttca agaactgatt
451   aatcggacga gaataaagat agagtcccat tctacatgtc aatgccggca
501   acaatgaaat ttatagtaag aggaaaatcc gtcgacttta aaaatcgtga
551   gggttcaagt ccctctatcc cc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AJ346927.1 nt Hallea stipulosa chloroplast DNA fo... 1731 bp Fleroya stipulosa QL-PLN-00-007 572 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.