Amplicon details

Amplicon:

79 bp
1     cgtcttcaaa gcaagtggat tgatgtgata tctccactga cgtaagggat
51    gacgcacaat cccactatcc ttcgcaaga 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JX475905.1 nt DU.GUS homologous recombination rep... 6396 bp DU.GUS homologous recombination reporter construct T-DNA QT-ELE-00-001 79 bp View
AB736152.1 nt Cloning vector pTY262 DNA, complete... 5078 bp Cloning vector pTY262 QT-ELE-00-001 79 bp View
KF018690.1 nt Ti plasmid binary vector pGH00.0126... 15608 bp Ti plasmid binary vector pGH00.0126 QT-ELE-00-001 79 bp View
AB863141.1 nt Cauliflower mosaic virus DNA, compl... 7984 bp Cauliflower mosaic virus QT-ELE-00-001 79 bp View
MN856142.1 nt Ti plasmid binary vector pGSh17.040... 16189 bp Ti plasmid binary vector pGSh17.0404 QT-ELE-00-001 79 bp View
KF537343.1 nt Cloning vector pEnEOi9mycThsp, comp... 4715 bp Cloning vector pEnEOi9mycThsp QT-ELE-00-001 79 bp View
KJ184338.1 nt Expression vector pHQEff-6, complet... 4079 bp Expression vector pHQEff-6 QT-ELE-00-001 79 bp View
MK896888.1 nt Plant binary expression vector pNC-... 6656 bp Plant binary expression vector pNC-BiFC-Ecc QT-ELE-00-001 79 bp View
MN956899.1 nt Cloning vector pDamBOB, complete se... 6035 bp Cloning vector pDamBOB QT-ELE-00-001 79 bp View
GU583854.1 emblreltgn Gossypium hirsutum transgenic culti... 2471 bp Gossypium hirsutum QT-ELE-00-001 79 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.